miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|168917083|gb|FE359106.1|FE359106 CGCATTCAAATTATTAATATTATTATTACATATTGTTCATTAAAAAAGGGAGTGGGTGTGACTTAGTGCAAACAAATGAA
TTGTTTTATATATTCCCGAAAAAAAGCCAAAAATCATCCGACCCGGAGTAGAAGGTGGACAGCAGCGACGAGGCCCAAAT
AAGCCCAGAAGAGATCGCGATGCCTTGAGATCGCCGAATTGCAAAAATCTTCCTCGCAGAAACAAGTCATCCCCTTGCGT
TTGTTACCTTCTTTCAGACAGACGTGATCGACGATGAAATAATTGACAATCAGCTGCTCCGTACACATCCGCCTCACGCG
TTCCTTGGGTGAGTAGCGATGTTCGACGATTTTAACACAACAACCCTTACACGTTTTGAAAGGTGGGCGTTCGTGCATTG
GGGCCGATTCATTGATATGTTTACAAAGCGGATTGTGGTAACTGTCGCAATCGTAGCACAAAATCGTCCGGCCGGATCGG
TTTATGCACTCCTCTTCGGCCGAAATGATGTTGGCCTGCAGACAAACCAAAGTGATGGAGAAGAAGACGGAAAGGAACCC
AATCAAATTGCGATCCTGCATCGTTTGGTGTGAGCAGAAAATGCGGTCGAAGAAAAAATCCCACACACACATACACACAC
ATACACACACACGGATTTTTCTTGTTTTACATGTCACAAAGGGAGAGGAGACTGCAGCACAGCAACTCGCGCGATTCTAC
GACATCCAAAATAACCAGCACGAATGTGTGTGTGCTATGTGGTTGCACCGACGGGA




Most similar to sp|B4KR21|QVR_DROMO

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|B4KR21|QVR_DROMO Protein quiver OS=Drosophila mojavensis GN=qvr
           PE=3 SV=2
          Length = 159

 Score =  115 bits (289), Expect = 3e-25
 Identities = 61/128 (47%), Positives = 79/128 (61%), Gaps = 1/128 (0%)
 Frame = -1

Query: 566 LIGFLSVFFSITLVCLQANIISAEEECINRSGRTILCYDCDSYHNPLCKH-INESAPMHE 390
           L+   ++F  +T V +     SA  EC  RS   I CY+CDS+ +  CK   N +A   +
Sbjct: 12  LLALAAIFGFLTFVWIP----SASAECQTRS---IYCYECDSWTDARCKDPFNYTALPRD 64

Query: 389 RPPFKTCKGCCVKIVEHRYSPKERVRRMCTEQLIVNYFIVDHVCLKEGNKRKGMTCFCEE 210
           +PP  TC GCCVK+V H+ SP E VRRMCT QL +N F+VDHVC+ E +   G  CFCEE
Sbjct: 65  QPPLMTCNGCCVKMVRHQRSPYEVVRRMCTSQLQINLFMVDHVCMME-SSGNGHMCFCEE 123

Query: 209 DFCNSAIS 186
           D CNS+ S
Sbjct: 124 DMCNSSQS 131